![]() ![]() Working with fasta datasets/alignments Fasta sequence extractor Here you can replace headers back and forth by submitting old and new headers - which you'll typically keep in a excel spreadsheet. Some programs do not like the fancy headers in fasta files and you have to live with short, unique names - that are really non-descriptive. Simple and fast way of extracting headers, edit them and reapplying them without worrying about the sequence itself. Simple and fast way of extraction the headers from fasta files - and optionally split each header into fields based on a chosen character/word. Working with fasta headers Fasta header extractor (and header splitter) Sequence 2 fasta converters (external tools) HCV Sequence Conversion Interface FaBox is online again, but all log data disappeared Reinstalled local phpserver, we're back. fasta2migrate added, only produces an infile. Added file upload to some services, rest will follow. log data was restored by manual copying of the server files DNAcollapser moved and integrated with common FaBox layout Fasta sequence extractor service added by request No updates in a while due to teaching and arrival of new baby Added email notification of shouts (so I'll answer them!) Comment lines are now allowed in input data FaBox has been updated, shoutbox removed FaBox has been accepted for publication in Molecular Ecology Notes FaBox paper is online, reference added to faq Updated to 1.1, mostly invisible code changes Alignment cropper updated (fasta output added) Alignment: show variable sites only added Show variable sites updated to 0- or 1-based sequence position numbering DNA collapser updated, now ignores case differences (ACG = acg) Faq updated: memory problems and downloading FaBox FaBox is available for direct download (see Faq) Small bug in random sequence generator fixed Moved to new server - a few code changes to still work. Version 1.5 - Haplotypecollapser working again. File upload is broken - use copy & paste from notepad instead. Our server no longer allows file uploads. Welcome to FaBox (1.61) - an online fasta sequence toolbox ![]()
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